VTA1

VTA1

Available structures

Ortholog search: PDBe RCSB

List of PDB id codes
2LXL, 2LXM, 4TXP, 4TXQ, 4TXR, 4U7E

Identifiers

VTA1, C6orf55, DRG-1, DRG1, LIP5, My012, SBP1, HSPC228, vesicle trafficking 1

External IDs

MGI: 1913451 HomoloGene: 6473 GeneCards: VTA1

Gene ontology
Molecular function	• protein C-terminus binding • protein binding
Cellular component	• cytoplasm • cytosol • endosome • endosome membrane • extracellular exosome • membrane
Biological process	• autophagy • protein transport • endosomal transport • multivesicular body assembly • viral budding • viral life cycle • multivesicular body sorting pathway • ESCRT III complex disassembly • transport
Sources:Amigo / QuickGO

Orthologs

Species

Human

Mouse


51534


66201


ENSG00000009844


ENSMUSG00000019868


Q9NP79


Q9CR26

RefSeq (mRNA)


NM_016485 NM_001286371 NM_001286372


NM_025418

RefSeq (protein)


NP_001273300.1 NP_001273301.1 NP_057569.2


NP_079694.2

Location (UCSC)

Chr 6: 142.15 – 142.22 Mb

Chr 10: 14.65 – 14.71 Mb

PubMed search

^[1]

^[2]

View/Edit Human

View/Edit Mouse

Vacuolar protein sorting-associated protein VTA1 homolog is a protein that in humans is encoded by the VTA1 gene.^[3]^[4]

References

↑ "Human PubMed Reference:".
↑ "Mouse PubMed Reference:".
↑ Shi J, Cai W, Chen X, Ying K, Zhang K, Xie Y (Aug 2001). "Identification of dopamine responsive mRNAs in glial cells by suppression subtractive hybridization". Brain Res. 910 (1-2): 29–37. doi:10.1016/S0006-8993(01)02393-9. PMID 11489251.
↑ "Entrez Gene: C6orf55 chromosome 6 open reading frame 55".

Further reading

Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction.". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing.". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
Zhang QH, Ye M, Wu XY, et al. (2001). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152.
Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
Tchernev VT, Mansfield TA, Giot L, et al. (2002). "The Chediak-Higashi protein interacts with SNARE complex and signal transduction proteins.". Mol. Med. 8 (1): 56–64. PMC 2039936. PMID 11984006.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs.". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Fujita H, Umezuki Y, Imamura K, et al. (2005). "Mammalian class E Vps proteins, SBP1 and mVps2/CHMP2A, interact with and regulate the function of an AAA-ATPase SKD1/Vps4B.". J. Cell. Sci. 117 (Pt 14): 2997–3009. doi:10.1242/jcs.01170. PMID 15173323.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network.". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.

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