Fisher transformation
In statistics, hypotheses about the value of the population correlation coefficient ρ between variables X and Y can be tested using the Fisher transformation[1][2] (aka Fisher z-transformation) applied to the sample correlation coefficient.
Definition
Given a set of N bivariate sample pairs (Xi, Yi), i = 1, ..., N, the sample correlation coefficient r is given by
Here stands for the covariance between the variables and and stands for the standard deviation of the respective variable. Fisher's z-transformation of r is defined as
where "ln" is the natural logarithm function and "arctanh" is the inverse hyperbolic tangent function.
If (X, Y) has a bivariate normal distribution, and if the pairs (Xi, Yi) are independent, then z is approximately normally distributed with mean
and standard error
where N is the sample size, and ρ is the true correlation coefficient.
This transformation, and its inverse
can be used to construct a large-sample confidence interval for r using standard normal theory and derivations.
Discussion
The Fisher transformation is an approximate variance-stabilizing transformation for r when X and Y follow a bivariate normal distribution. This means that the variance of z is approximately constant for all values of the population correlation coefficient ρ. Without the Fisher transformation, the variance of r grows smaller as |ρ| gets closer to 1. Since the Fisher transformation is approximately the identity function when |r| < 1/2, it is sometimes useful to remember that the variance of r is well approximated by 1/N as long as |ρ| is not too large and N is not too small. This is related to the fact that the asymptotic variance of r is 1 for bivariate normal data.
The behavior of this transform has been extensively studied since Fisher introduced it in 1915. Fisher himself found the exact distribution of z for data from a bivariate normal distribution in 1921; Gayen in 1951[3] determined the exact distribution of z for data from a bivariate Type A Edgeworth distribution. Hotelling in 1953 calculated the Taylor series expressions for the moments of z and several related statistics[4] and Hawkins in 1989 discovered the asymptotic distribution of z for data from a distribution with bounded fourth moments.[5]
Other uses
While the Fisher transformation is mainly associated with the Pearson product-moment correlation coefficient for bivariate normal observations, it can also be applied to Spearman's rank correlation coefficient in more general cases. A similar result for the asymptotic distribution applies, but with a minor adjustment factor: see the latter article for details.
See also
- Data transformation (statistics)
- Meta-analysis (this transformation is used in meta analysis for stabilizing the variance)
- R implementation
References
- ↑ Fisher, R. A. (1915). "Frequency distribution of the values of the correlation coefficient in samples of an indefinitely large population". Biometrika. Biometrika Trust. 10 (4): 507–521. doi:10.2307/2331838. JSTOR 2331838.
- ↑ Fisher, R. A. (1921). "On the 'probable error' of a coefficient of correlation deduced from a small sample" (PDF). Metron. 1: 3–32.
- ↑ Gayen, A. K. (1951). "The Frequency Distribution of the Product-Moment Correlation Coefficient in Random Samples of Any Size Drawn from Non-Normal Universes". Biometrika. Biometrika Trust. 38 (1/2): 219–247. doi:10.1093/biomet/38.1-2.219. JSTOR 2332329.
- ↑ Hotelling, H (1953). "New light on the correlation coefficient and its transforms". Journal of the Royal Statistical Society, Series B. Blackwell Publishing. 15 (2): 193–225. JSTOR 2983768.
- ↑ Hawkins, D. L. (1989). "Using U statistics to derive the asymptotic distribution of Fisher's Z statistic". The American Statistician. American Statistical Association. 43 (4): 235–237. doi:10.2307/2685369. JSTOR 2685369.